Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp13P33435 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp13P33435 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp13P33435 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp13P33435 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp13P33435 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.12□□□□□ -0.31
Mmp13P33435 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp13P33435 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.12□□□□□ -0.31
Mmp13P33435 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Mmp13P33435 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Mmp13P33435 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Mmp13P33435 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.11□□□□□ -0.31
Mmp13P33435 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.11□□□□□ -0.31
Mmp13P33435 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.11□□□□□ -0.31
Mmp13P33435 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.11□□□□□ -0.31
Mmp13P33435 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.11□□□□□ -0.31
Mmp13P33435 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.11□□□□□ -0.31
Mmp13P33435 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Mmp13P33435 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Mmp13P33435 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.11□□□□□ -0.31
Mmp13P33435 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.11□□□□□ -0.31
Mmp13P33435 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.11□□□□□ -0.31
Mmp13P33435 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.11□□□□□ -0.31
Mmp13P33435 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Mmp13P33435 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Mmp13P33435 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.11□□□□□ -0.31
Mmp13P33435 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.1□□□□□ -0.31
Mmp13P33435 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.1□□□□□ -0.31
Mmp13P33435 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.1□□□□□ -0.31
Mmp13P33435 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.1□□□□□ -0.31
Mmp13P33435 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.1□□□□□ -0.31
Mmp13P33435 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.1□□□□□ -0.31
Mmp13P33435 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.1□□□□□ -0.31
Mmp13P33435 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.1□□□□□ -0.31
Mmp13P33435 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Mmp13P33435 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Mmp13P33435 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms