Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.31□□□□□ -0.44
BdnfP21237 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
BdnfP21237 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
BdnfP21237 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
BdnfP21237 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.31□□□□□ -0.44
BdnfP21237 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.31□□□□□ -0.44
BdnfP21237 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
BdnfP21237 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Gm38223-201ENSMUST00000194484 695 ntBASIC12.31□□□□□ -0.44
BdnfP21237 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Gm2423-201ENSMUST00000074863 733 ntBASIC12.31□□□□□ -0.44
BdnfP21237 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.31□□□□□ -0.44
BdnfP21237 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.31□□□□□ -0.44
BdnfP21237 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BdnfP21237 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
BdnfP21237 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
BdnfP21237 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.3□□□□□ -0.44
BdnfP21237 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
BdnfP21237 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BdnfP21237 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.29□□□□□ -0.44
BdnfP21237 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BdnfP21237 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BdnfP21237 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.29□□□□□ -0.44
BdnfP21237 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.29□□□□□ -0.44
BdnfP21237 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.29□□□□□ -0.44
BdnfP21237 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
BdnfP21237 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Gm28631-201ENSMUST00000190740 334 ntBASIC12.29□□□□□ -0.44
BdnfP21237 Gm19220-201ENSMUST00000222682 803 ntBASIC12.29□□□□□ -0.44
BdnfP21237 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.29□□□□□ -0.44
BdnfP21237 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
BdnfP21237 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
BdnfP21237 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
BdnfP21237 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.29□□□□□ -0.44
BdnfP21237 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms