Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tpm3P21107 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Tpm3P21107 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Gm28630-201ENSMUST00000187806 498 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 Gm38144-201ENSMUST00000192790 465 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Gm46209-201ENSMUST00000217912 553 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 Shd-206ENSMUST00000225145 998 ntBASIC14.32□□□□□ -0.12
Tpm3P21107 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tpm3P21107 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tpm3P21107 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.31□□□□□ -0.12
Tpm3P21107 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.31□□□□□ -0.12
Tpm3P21107 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Tpm3P21107 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Gm25911-201ENSMUST00000157621 56 ntBASIC14.31□□□□□ -0.12
Tpm3P21107 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.31□□□□□ -0.12
Tpm3P21107 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.31□□□□□ -0.12
Tpm3P21107 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.31□□□□□ -0.12
Tpm3P21107 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Gm24447-201ENSMUST00000083977 338 ntBASIC14.31□□□□□ -0.12
Tpm3P21107 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tpm3P21107 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.31□□□□□ -0.12
Tpm3P21107 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.31□□□□□ -0.12
Tpm3P21107 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.31□□□□□ -0.12
Tpm3P21107 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.31□□□□□ -0.12
Tpm3P21107 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tpm3P21107 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Tpm3P21107 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.3□□□□□ -0.12
Tpm3P21107 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tpm3P21107 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm3P21107 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm3P21107 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm3P21107 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Tpm3P21107 Gm6415-201ENSMUST00000118488 348 ntBASIC14.3□□□□□ -0.12
Tpm3P21107 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.3□□□□□ -0.12
Tpm3P21107 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.3□□□□□ -0.12
Tpm3P21107 Gm25144-201ENSMUST00000179561 110 ntBASIC14.3□□□□□ -0.12
Tpm3P21107 Gm25352-201ENSMUST00000179815 110 ntBASIC14.3□□□□□ -0.12
Tpm3P21107 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms