Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TP20293 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.07□□□□□ -0.48
TP20293 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TP20293 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.07□□□□□ -0.48
TP20293 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TP20293 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.07□□□□□ -0.48
TP20293 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.07□□□□□ -0.48
TP20293 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.07□□□□□ -0.48
TP20293 Gm17150-201ENSMUST00000165577 381 ntBASIC12.07□□□□□ -0.48
TP20293 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Gm37922-201ENSMUST00000195596 455 ntBASIC12.07□□□□□ -0.48
TP20293 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.07□□□□□ -0.48
TP20293 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.07□□□□□ -0.48
TP20293 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
TP20293 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.07□□□□□ -0.48
TP20293 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TP20293 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.07□□□□□ -0.48
TP20293 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TP20293 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.06□□□□□ -0.48
TP20293 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.06□□□□□ -0.48
TP20293 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.06□□□□□ -0.48
TP20293 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.06□□□□□ -0.48
TP20293 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.06□□□□□ -0.48
TP20293 Gm24644-201ENSMUST00000157114 139 ntBASIC12.06□□□□□ -0.48
TP20293 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Gm37497-201ENSMUST00000195830 798 ntBASIC12.06□□□□□ -0.48
TP20293 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.06□□□□□ -0.48
TP20293 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.06□□□□□ -0.48
TP20293 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.06□□□□□ -0.48
TP20293 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.06□□□□□ -0.48
TP20293 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.06□□□□□ -0.48
TP20293 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
TP20293 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.06□□□□□ -0.48
TP20293 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TP20293 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TP20293 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TP20293 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TP20293 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TP20293 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms