Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.29□□□□□ -0.44
Msx1P13297 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Msx1P13297 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Msx1P13297 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Msx1P13297 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.28□□□□□ -0.44
Msx1P13297 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Msx1P13297 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Gm4732-201ENSMUST00000118778 473 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Gm16420-201ENSMUST00000120258 856 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Gm14381-201ENSMUST00000122105 414 ntBASIC12.28□□□□□ -0.44
Msx1P13297 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Gm16379-201ENSMUST00000161469 348 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.28□□□□□ -0.44
Msx1P13297 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.28□□□□□ -0.44
Msx1P13297 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Gm37857-201ENSMUST00000191784 1199 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Gm8762-201ENSMUST00000193486 339 ntBASIC12.28□□□□□ -0.44
Msx1P13297 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.28□□□□□ -0.44
Msx1P13297 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.28□□□□□ -0.44
Msx1P13297 CT025525.1-201ENSMUST00000226325 1054 ntBASIC12.28□□□□□ -0.44
Msx1P13297 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.28□□□□□ -0.44
Msx1P13297 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.28□□□□□ -0.44
Msx1P13297 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.28□□□□□ -0.44
Msx1P13297 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Msx1P13297 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msx1P13297 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msx1P13297 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.27□□□□□ -0.44
Msx1P13297 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Msx1P13297 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Msx1P13297 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Msx1P13297 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msx1P13297 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Msx1P13297 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msx1P13297 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Msx1P13297 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msx1P13297 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msx1P13297 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msx1P13297 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msx1P13297 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msx1P13297 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msx1P13297 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.27□□□□□ -0.45
Msx1P13297 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Gm13786-201ENSMUST00000122371 333 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.27□□□□□ -0.45
Msx1P13297 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.27□□□□□ -0.45
Msx1P13297 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.27□□□□□ -0.45
Msx1P13297 Gm28439-201ENSMUST00000187714 876 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm8581-201ENSMUST00000188636 890 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm8190-201ENSMUST00000199603 586 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.27□□□□□ -0.45
Msx1P13297 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Gm10608-202ENSMUST00000213924 676 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 AC162940.1-201ENSMUST00000224745 1167 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Msx1P13297 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.27□□□□□ -0.45
Msx1P13297 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.27□□□□□ -0.45
Msx1P13297 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Msx1P13297 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms