Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
PtcraP0C6B2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gm6266-201ENSMUST00000203844 806 ntBASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.15□□□□□ -0.62
PtcraP0C6B2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.15□□□□□ -0.62
PtcraP0C6B2 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.15□□□□□ -0.62
PtcraP0C6B2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gm24526-201ENSMUST00000082921 158 ntBASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
PtcraP0C6B2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
PtcraP0C6B2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.15□□□□□ -0.63
PtcraP0C6B2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
PtcraP0C6B2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
PtcraP0C6B2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
PtcraP0C6B2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
PtcraP0C6B2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
PtcraP0C6B2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
PtcraP0C6B2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm15824-201ENSMUST00000119516 955 ntBASIC11.14□□□□□ -0.63
PtcraP0C6B2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm45784-201ENSMUST00000188360 142 ntBASIC11.14□□□□□ -0.63
PtcraP0C6B2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.14□□□□□ -0.63
PtcraP0C6B2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm25007-201ENSMUST00000083808 133 ntBASIC11.14□□□□□ -0.63
PtcraP0C6B2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
PtcraP0C6B2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms