Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.96□□□□□ -0.17
Chmp6P0C0A3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Mir1982-201ENSMUST00000157368 74 ntBASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Gm27731-201ENSMUST00000185192 107 ntBASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Gm29127-201ENSMUST00000188304 517 ntBASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Gm37497-201ENSMUST00000195830 798 ntBASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp6P0C0A3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Chmp6P0C0A3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Gm4271-201ENSMUST00000174444 973 ntBASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp6P0C0A3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Gm16177-201ENSMUST00000120728 718 ntBASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Gm26185-201ENSMUST00000157692 266 ntBASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp6P0C0A3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.94□□□□□ -0.18
Chmp6P0C0A3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms