Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Gm5133-201ENSMUST00000118940 1255 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.83□□□□□ -0.36
Hoxb3P09026 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.83□□□□□ -0.36
Hoxb3P09026 Gm15276-201ENSMUST00000145953 498 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 Gm25072-201ENSMUST00000175233 235 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Gm37751-201ENSMUST00000192440 1198 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Gm44262-201ENSMUST00000204969 372 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hoxb3P09026 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hoxb3P09026 Gm32025-201ENSMUST00000217960 307 ntBASIC12.83□□□□□ -0.36
Hoxb3P09026 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC12.83□□□□□ -0.36
Hoxb3P09026 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Hoxb3P09026 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hoxb3P09026 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hoxb3P09026 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.82□□□□□ -0.36
Hoxb3P09026 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.82□□□□□ -0.36
Hoxb3P09026 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Gm38217-201ENSMUST00000194358 910 ntBASIC12.82□□□□□ -0.36
Hoxb3P09026 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Gm6867-201ENSMUST00000219165 425 ntBASIC12.82□□□□□ -0.36
Hoxb3P09026 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.82□□□□□ -0.36
Hoxb3P09026 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxb3P09026 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxb3P09026 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.81□□□□□ -0.36
Hoxb3P09026 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gm42511-201ENSMUST00000196160 234 ntBASIC12.81□□□□□ -0.36
Hoxb3P09026 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms