Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Syn1O88935 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Syn1O88935 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Syn1O88935 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Gm15711-201ENSMUST00000118889 535 ntBASIC13.17□□□□□ -0.3
Syn1O88935 Gm14704-201ENSMUST00000120300 874 ntBASIC13.17□□□□□ -0.3
Syn1O88935 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.17□□□□□ -0.3
Syn1O88935 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.17□□□□□ -0.3
Syn1O88935 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.17□□□□□ -0.3
Syn1O88935 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.17□□□□□ -0.3
Syn1O88935 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.17□□□□□ -0.3
Syn1O88935 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.17□□□□□ -0.3
Syn1O88935 Gm5369-201ENSMUST00000217499 588 ntBASIC13.17□□□□□ -0.3
Syn1O88935 Gm45925-201ENSMUST00000218882 744 ntBASIC13.17□□□□□ -0.3
Syn1O88935 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Syn1O88935 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Syn1O88935 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.17□□□□□ -0.3
Syn1O88935 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syn1O88935 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Syn1O88935 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Syn1O88935 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Gm12380-201ENSMUST00000119012 544 ntBASIC13.16□□□□□ -0.3
Syn1O88935 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.16□□□□□ -0.3
Syn1O88935 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Gm6963-201ENSMUST00000147879 379 ntBASIC13.16□□□□□ -0.3
Syn1O88935 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.16□□□□□ -0.3
Syn1O88935 Gm9358-201ENSMUST00000183067 927 ntBASIC13.16□□□□□ -0.3
Syn1O88935 Gm27627-201ENSMUST00000183644 150 ntBASIC13.16□□□□□ -0.3
Syn1O88935 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Syn1O88935 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.16□□□□□ -0.3
Syn1O88935 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.16□□□□□ -0.3
Syn1O88935 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Syn1O88935 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.16□□□□□ -0.3
Syn1O88935 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syn1O88935 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syn1O88935 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syn1O88935 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Syn1O88935 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syn1O88935 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syn1O88935 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syn1O88935 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.15□□□□□ -0.3
Syn1O88935 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.15□□□□□ -0.3
Syn1O88935 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.15□□□□□ -0.3
Syn1O88935 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Syn1O88935 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Syn1O88935 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.15□□□□□ -0.3
Syn1O88935 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syn1O88935 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.15□□□□□ -0.3
Syn1O88935 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.15□□□□□ -0.3
Syn1O88935 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.15□□□□□ -0.3
Syn1O88935 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.15□□□□□ -0.3
Syn1O88935 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms