Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hcn1O88704 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hcn1O88704 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hcn1O88704 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Gm15824-201ENSMUST00000119516 955 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm13829-201ENSMUST00000119600 138 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm11803-201ENSMUST00000119966 444 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Hcn1O88704 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Proscos-202ENSMUST00000178990 666 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm6266-201ENSMUST00000203844 806 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.28□□□□□ -0.44
Hcn1O88704 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.28□□□□□ -0.44
Hcn1O88704 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.28□□□□□ -0.44
Hcn1O88704 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.28□□□□□ -0.44
Hcn1O88704 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.28□□□□□ -0.44
Hcn1O88704 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.28□□□□□ -0.44
Hcn1O88704 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.28□□□□□ -0.44
Hcn1O88704 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.28□□□□□ -0.44
Hcn1O88704 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hcn1O88704 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.27□□□□□ -0.44
Hcn1O88704 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Hcn1O88704 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hcn1O88704 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Mir874-201ENSMUST00000104769 76 ntBASIC12.27□□□□□ -0.45
Hcn1O88704 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Gm12390-201ENSMUST00000117897 397 ntBASIC12.27□□□□□ -0.45
Hcn1O88704 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.27□□□□□ -0.45
Hcn1O88704 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.27□□□□□ -0.45
Hcn1O88704 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Gm27847-201ENSMUST00000183711 107 ntBASIC12.27□□□□□ -0.45
Hcn1O88704 Gm27375-201ENSMUST00000183799 107 ntBASIC12.27□□□□□ -0.45
Hcn1O88704 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Hcn1O88704 Gm7561-201ENSMUST00000211203 886 ntBASIC12.27□□□□□ -0.45
Hcn1O88704 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hcn1O88704 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.27□□□□□ -0.45
Hcn1O88704 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Hcn1O88704 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hcn1O88704 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.27□□□□□ -0.45
Hcn1O88704 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hcn1O88704 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hcn1O88704 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms