Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cops4O88544 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cops4O88544 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Cops4O88544 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cops4O88544 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.82□□□□□ -0.52
Cops4O88544 Gm27989-201ENSMUST00000184721 107 ntBASIC11.82□□□□□ -0.52
Cops4O88544 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.82□□□□□ -0.52
Cops4O88544 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.82□□□□□ -0.52
Cops4O88544 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cops4O88544 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.82□□□□□ -0.52
Cops4O88544 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cops4O88544 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cops4O88544 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.81□□□□□ -0.52
Cops4O88544 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Cops4O88544 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cops4O88544 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.81□□□□□ -0.52
Cops4O88544 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.81□□□□□ -0.52
Cops4O88544 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cops4O88544 Gm9522-201ENSMUST00000182394 926 ntBASIC11.81□□□□□ -0.52
Cops4O88544 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.81□□□□□ -0.52
Cops4O88544 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Gm20445-201ENSMUST00000061905 565 ntBASIC11.81□□□□□ -0.52
Cops4O88544 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cops4O88544 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cops4O88544 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cops4O88544 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cops4O88544 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms