Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna4O70174 Gm8099-201ENSMUST00000200510 742 ntBASIC12.92□□□□□ -0.34
Chrna4O70174 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna4O70174 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.92□□□□□ -0.34
Chrna4O70174 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna4O70174 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.92□□□□□ -0.34
Chrna4O70174 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Chrna4O70174 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna4O70174 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.92□□□□□ -0.34
Chrna4O70174 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna4O70174 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chrna4O70174 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.92□□□□□ -0.34
Chrna4O70174 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna4O70174 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chrna4O70174 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.91□□□□□ -0.34
Chrna4O70174 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Chrna4O70174 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Chrna4O70174 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.91□□□□□ -0.34
Chrna4O70174 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.91□□□□□ -0.34
Chrna4O70174 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Chrna4O70174 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chrna4O70174 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Chrna4O70174 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chrna4O70174 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.9□□□□□ -0.34
Chrna4O70174 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.9□□□□□ -0.34
Chrna4O70174 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 Gm18187-201ENSMUST00000196476 984 ntBASIC12.9□□□□□ -0.34
Chrna4O70174 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.9□□□□□ -0.34
Chrna4O70174 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Chrna4O70174 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chrna4O70174 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chrna4O70174 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chrna4O70174 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chrna4O70174 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Chrna4O70174 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.89□□□□□ -0.35
Chrna4O70174 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Gm13829-201ENSMUST00000119600 138 ntBASIC12.89□□□□□ -0.35
Chrna4O70174 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.89□□□□□ -0.35
Chrna4O70174 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.89□□□□□ -0.35
Chrna4O70174 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.89□□□□□ -0.35
Chrna4O70174 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Chrna4O70174 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Chrna4O70174 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chrna4O70174 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Chrna4O70174 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms