Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.61□□□□□ -0.55
Rnf13O54965 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Rnf13O54965 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.61□□□□□ -0.55
Rnf13O54965 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Rnf13O54965 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rnf13O54965 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.6□□□□□ -0.55
Rnf13O54965 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rnf13O54965 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Gm14719-201ENSMUST00000121891 340 ntBASIC11.6□□□□□ -0.55
Rnf13O54965 Gm11978-201ENSMUST00000122315 466 ntBASIC11.6□□□□□ -0.55
Rnf13O54965 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.6□□□□□ -0.55
Rnf13O54965 Gm38223-201ENSMUST00000194484 695 ntBASIC11.6□□□□□ -0.55
Rnf13O54965 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Rnf13O54965 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.6□□□□□ -0.55
Rnf13O54965 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.6□□□□□ -0.55
Rnf13O54965 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Rnf13O54965 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rnf13O54965 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf13O54965 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf13O54965 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf13O54965 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf13O54965 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.59□□□□□ -0.55
Rnf13O54965 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf13O54965 Mir686-201ENSMUST00000102174 109 ntBASIC11.59□□□□□ -0.55
Rnf13O54965 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.59□□□□□ -0.55
Rnf13O54965 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.59□□□□□ -0.55
Rnf13O54965 Gm44872-201ENSMUST00000207864 420 ntBASIC11.59□□□□□ -0.55
Rnf13O54965 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf13O54965 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.59□□□□□ -0.55
Rnf13O54965 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.59□□□□□ -0.55
Rnf13O54965 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Rnf13O54965 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf13O54965 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms