Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac1O09106 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hdac1O09106 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hdac1O09106 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Gm14704-201ENSMUST00000120300 874 ntBASIC15.2■□□□□ 0.02
Hdac1O09106 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.2■□□□□ 0.02
Hdac1O09106 Gm44855-201ENSMUST00000205725 362 ntBASIC15.2■□□□□ 0.02
Hdac1O09106 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.2■□□□□ 0.02
Hdac1O09106 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hdac1O09106 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15.2■□□□□ 0.02
Hdac1O09106 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hdac1O09106 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hdac1O09106 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.19■□□□□ 0.02
Hdac1O09106 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Gm15703-201ENSMUST00000120250 880 ntBASIC15.19■□□□□ 0.02
Hdac1O09106 Gm13123-201ENSMUST00000122173 492 ntBASIC15.19■□□□□ 0.02
Hdac1O09106 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Gm8463-201ENSMUST00000208573 613 ntBASIC15.19■□□□□ 0.02
Hdac1O09106 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Gm8227-201ENSMUST00000223306 571 ntBASIC15.19■□□□□ 0.02
Hdac1O09106 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hdac1O09106 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC15.19■□□□□ 0.02
Hdac1O09106 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hdac1O09106 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.19■□□□□ 0.02
Hdac1O09106 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hdac1O09106 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Hdac1O09106 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Gm11618-201ENSMUST00000117946 267 ntBASIC15.18■□□□□ 0.02
Hdac1O09106 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.18■□□□□ 0.02
Hdac1O09106 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.18■□□□□ 0.02
Hdac1O09106 Gm22121-201ENSMUST00000175148 54 ntBASIC15.18■□□□□ 0.02
Hdac1O09106 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.18■□□□□ 0.02
Hdac1O09106 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Hdac1O09106 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Hdac1O09106 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Hdac1O09106 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hdac1O09106 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hdac1O09106 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hdac1O09106 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms