Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.86□□□□□ -0.67
Gm3727J3QM54 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Gm3727J3QM54 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Gm11745-201ENSMUST00000121669 448 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Gm9229-201ENSMUST00000222777 126 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Psmb5-202ENSMUST00000227257 622 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Map1b-203ENSMUST00000223725 2669 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.85□□□□□ -0.67
Gm3727J3QM54 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Gm3727J3QM54 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.84□□□□□ -0.67
Gm3727J3QM54 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.84□□□□□ -0.67
Gm3727J3QM54 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Gm15653-201ENSMUST00000119247 907 ntBASIC10.84□□□□□ -0.67
Gm3727J3QM54 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.84□□□□□ -0.67
Gm3727J3QM54 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Gm9727-201ENSMUST00000161387 555 ntBASIC10.84□□□□□ -0.67
Gm3727J3QM54 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.84□□□□□ -0.67
Gm3727J3QM54 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms