Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb9E9Q5G2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gm43758-201ENSMUST00000199500 367 ntBASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb9E9Q5G2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm12058-201ENSMUST00000118614 437 ntBASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm2546-201ENSMUST00000182630 991 ntBASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm43822-201ENSMUST00000200285 476 ntBASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm3961-201ENSMUST00000204425 994 ntBASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm5950-201ENSMUST00000213337 772 ntBASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb9E9Q5G2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pcdhb9E9Q5G2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb9E9Q5G2 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms