Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cpsf4lE9Q2N0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.67
Cpsf4lE9Q2N0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cpsf4lE9Q2N0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Gm14127-201ENSMUST00000117906 678 ntBASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Gm38092-201ENSMUST00000195600 653 ntBASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cpsf4lE9Q2N0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm7809-201ENSMUST00000153199 742 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Snora78-201ENSMUST00000158630 128 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm16296-201ENSMUST00000159905 325 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm27514-201ENSMUST00000183692 110 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Mir7085-201ENSMUST00000184353 66 ntBASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cpsf4lE9Q2N0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms