Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 AC126799.1-201ENSMUST00000221976 246 ntBASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Gm5455-201ENSMUST00000058710 715 ntBASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Gm26448-201ENSMUST00000082446 203 ntBASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scaf11E9PZM7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm11509-201ENSMUST00000117358 325 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm14724-201ENSMUST00000118400 537 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm16071-201ENSMUST00000119589 793 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm12516-201ENSMUST00000120819 385 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm17826-201ENSMUST00000189720 798 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm37299-201ENSMUST00000193951 826 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm19931-201ENSMUST00000198920 368 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm19640-201ENSMUST00000214849 464 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm7541-201ENSMUST00000118361 535 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm1848-201ENSMUST00000120711 789 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm27910-201ENSMUST00000185004 107 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm5621-201ENSMUST00000187303 640 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Gm43184-201ENSMUST00000197247 542 ntBASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.56■□□□□ 0.4
Scaf11E9PZM7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Gm11980-201ENSMUST00000121445 986 ntBASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Gm6485-201ENSMUST00000160676 439 ntBASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Gm18159-201ENSMUST00000174516 1070 ntBASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Gm2965-201ENSMUST00000198365 343 ntBASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scaf11E9PZM7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms