Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Pcdh17E9PXF0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Gm24255-201ENSMUST00000104481 128 ntBASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Gm26083-201ENSMUST00000157904 193 ntBASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Gm8738-201ENSMUST00000172606 329 ntBASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Pcdh17E9PXF0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm21769-201ENSMUST00000211922 111 ntBASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms