Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm28043E0CXC2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm28043E0CXC2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Mir874-201ENSMUST00000104769 76 ntBASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm6983-201ENSMUST00000214912 628 ntBASIC12.85□□□□□ -0.35
Gm28043E0CXC2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.85□□□□□ -0.35
Gm28043E0CXC2 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Gm28043E0CXC2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Gm28043E0CXC2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms