Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx6-2D3Z4R4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm15957-201ENSMUST00000118893 974 ntBASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm43347-201ENSMUST00000200226 580 ntBASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm45841-201ENSMUST00000207700 164 ntBASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx6-2D3Z4R4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx6-2D3Z4R4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms