Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.49□□□□□ -0.41
Clip3B9EHT4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Gm10146-201ENSMUST00000072739 309 ntBASIC12.49□□□□□ -0.41
Clip3B9EHT4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clip3B9EHT4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm4271-201ENSMUST00000174444 973 ntBASIC12.48□□□□□ -0.41
Clip3B9EHT4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm27572-201ENSMUST00000183702 255 ntBASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm44069-201ENSMUST00000204898 506 ntBASIC12.48□□□□□ -0.41
Clip3B9EHT4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clip3B9EHT4 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.47□□□□□ -0.41
Clip3B9EHT4 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.47□□□□□ -0.41
Clip3B9EHT4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.47□□□□□ -0.41
Clip3B9EHT4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Gm5370-201ENSMUST00000187187 574 ntBASIC12.47□□□□□ -0.41
Clip3B9EHT4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Gm37424-201ENSMUST00000191727 561 ntBASIC12.47□□□□□ -0.41
Clip3B9EHT4 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Gm10268-201ENSMUST00000085340 555 ntBASIC12.47□□□□□ -0.41
Clip3B9EHT4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.47□□□□□ -0.41
Clip3B9EHT4 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.47□□□□□ -0.41
Clip3B9EHT4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms