Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm23596-201ENSMUST00000104304 132 ntBASIC10.27□□□□□ -0.77
Chd6A3KFM7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Chd6A3KFM7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Chd6A3KFM7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Chd6A3KFM7 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC10.27□□□□□ -0.77
Chd6A3KFM7 Gm37197-201ENSMUST00000195607 401 ntBASIC10.27□□□□□ -0.77
Chd6A3KFM7 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.27□□□□□ -0.77
Chd6A3KFM7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm11836-201ENSMUST00000121022 441 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm15620-201ENSMUST00000122949 270 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm24954-201ENSMUST00000178831 110 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm17944-201ENSMUST00000186351 643 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm19587-201ENSMUST00000191395 545 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.26□□□□□ -0.77
Chd6A3KFM7 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd6A3KFM7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Gm12736-201ENSMUST00000119330 236 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 Gm14999-201ENSMUST00000121039 624 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 Gm11952-201ENSMUST00000121172 821 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Gm23363-201ENSMUST00000175024 79 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Chd6A3KFM7 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.25□□□□□ -0.77
Chd6A3KFM7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms