Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn3aA2ASI5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.15□□□□□ -0.14
Scn3aA2ASI5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Gm3786-201ENSMUST00000202659 378 ntBASIC14.15□□□□□ -0.14
Scn3aA2ASI5 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scn3aA2ASI5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scn3aA2ASI5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Gm12176-201ENSMUST00000121420 875 ntBASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn3aA2ASI5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms