Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Gm24845-201ENSMUST00000158034 109 ntBASIC13.34□□□□□ -0.27
Scn1aA2APX8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.34□□□□□ -0.27
Scn1aA2APX8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Gm24231-201ENSMUST00000104315 133 ntBASIC13.34□□□□□ -0.27
Scn1aA2APX8 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.34□□□□□ -0.27
Scn1aA2APX8 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.34□□□□□ -0.27
Scn1aA2APX8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1aA2APX8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.33□□□□□ -0.27
Scn1aA2APX8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.33□□□□□ -0.27
Scn1aA2APX8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Scn1aA2APX8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.33□□□□□ -0.28
Scn1aA2APX8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn1aA2APX8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Gm42937-201ENSMUST00000197360 752 ntBASIC13.33□□□□□ -0.28
Scn1aA2APX8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1aA2APX8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Rmrp-201ENSMUST00000157463 271 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm38317-201ENSMUST00000195564 343 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm24830-201ENSMUST00000102024 166 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.32□□□□□ -0.28
Scn1aA2APX8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn1aA2APX8 Gm25890-201ENSMUST00000177643 165 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms