Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 CT025618.1-201ENSMUST00000227409 1279 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm15033-201ENSMUST00000118188 673 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Gm37207-201ENSMUST00000194284 296 ntBASIC6.56□□□□□ -1.36
Ubr4A2AN08 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ubr4A2AN08 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm12129-201ENSMUST00000120104 1147 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm25554-201ENSMUST00000158075 113 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm12407-201ENSMUST00000180219 324 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm23595-201ENSMUST00000104306 130 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm8226-201ENSMUST00000190511 798 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm5714-201ENSMUST00000197343 566 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm44270-201ENSMUST00000203084 1234 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 AC154477.1-201ENSMUST00000226515 773 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 AC137842.2-201ENSMUST00000227734 797 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm4978-201ENSMUST00000071565 801 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm12418-201ENSMUST00000118116 942 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm13505-201ENSMUST00000121666 817 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm26353-201ENSMUST00000158224 255 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm42629-201ENSMUST00000199063 1102 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm38246-201ENSMUST00000194318 1511 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm44241-201ENSMUST00000203230 1662 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm14829-201ENSMUST00000121499 1138 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm6606-201ENSMUST00000193613 947 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm7939-201ENSMUST00000201233 1050 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 BC080696-201ENSMUST00000202858 1218 ntBASIC6.55□□□□□ -1.36
Ubr4A2AN08 Gm8436-201ENSMUST00000210152 1080 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 429.9 ms