Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gm45668-201ENSMUST00000211271 493 ntBASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccdc194A0A140LIT1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Gm28693-202ENSMUST00000190758 331 ntBASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Gm10576-201ENSMUST00000191927 825 ntBASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Gm38671-201ENSMUST00000200573 130 ntBASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc194A0A140LIT1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ccdc194A0A140LIT1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms