Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav3n-3A0A0G2JEM0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm6912-201ENSMUST00000117218 544 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm15693-201ENSMUST00000120470 637 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm25911-201ENSMUST00000157621 56 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm10766-202ENSMUST00000194123 606 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm43474-201ENSMUST00000196415 774 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Btrc-209ENSMUST00000224478 2194 ntBASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm15770-201ENSMUST00000117498 584 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm12428-201ENSMUST00000119844 727 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms