Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Matn2-203ENSMUST00000226766 3252 ntBASIC10.49□□□□□ -0.73
Trav18A0A075B656 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.49□□□□□ -0.73
Trav18A0A075B656 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav18A0A075B656 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.48□□□□□ -0.73
Trav18A0A075B656 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Gm18473-201ENSMUST00000220543 868 ntBASIC10.48□□□□□ -0.73
Trav18A0A075B656 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Gm16372-201ENSMUST00000073088 450 ntBASIC10.48□□□□□ -0.73
Trav18A0A075B656 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.48□□□□□ -0.73
Trav18A0A075B656 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav18A0A075B656 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms