Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Phf1Q9Z1B8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Gm25261-201ENSMUST00000157416 134 ntBASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Mir7221-201ENSMUST00000184009 72 ntBASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Phf1Q9Z1B8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Mir686-201ENSMUST00000102174 109 ntBASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Gm38002-201ENSMUST00000193255 180 ntBASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms