Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcb1Q9Z0H3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm15547-201ENSMUST00000122152 333 ntBASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm6082-201ENSMUST00000215204 454 ntBASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcb1Q9Z0H3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm15808-201ENSMUST00000119046 604 ntBASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm13875-201ENSMUST00000120162 282 ntBASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm17376-201ENSMUST00000166016 84 ntBASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcb1Q9Z0H3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smarcb1Q9Z0H3 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Gm15703-201ENSMUST00000120250 880 ntBASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms