Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ClcnkaQ9WUB7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ClcnkaQ9WUB7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
ClcnkaQ9WUB7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
ClcnkaQ9WUB7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
ClcnkaQ9WUB7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
ClcnkaQ9WUB7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
ClcnkaQ9WUB7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Gm24196-201ENSMUST00000179161 110 ntBASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ClcnkaQ9WUB7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms