Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
AmfrQ9R049 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.36□□□□□ -0.11
AmfrQ9R049 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.36□□□□□ -0.11
AmfrQ9R049 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
AmfrQ9R049 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
AmfrQ9R049 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.36□□□□□ -0.11
AmfrQ9R049 Gm14660-201ENSMUST00000119809 575 ntBASIC14.36□□□□□ -0.11
AmfrQ9R049 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
AmfrQ9R049 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 AY702102-202ENSMUST00000194651 1173 ntBASIC14.36□□□□□ -0.11
AmfrQ9R049 Gm37497-201ENSMUST00000195830 798 ntBASIC14.36□□□□□ -0.11
AmfrQ9R049 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.36□□□□□ -0.11
AmfrQ9R049 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.36□□□□□ -0.11
AmfrQ9R049 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.36□□□□□ -0.11
AmfrQ9R049 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
AmfrQ9R049 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.36□□□□□ -0.11
AmfrQ9R049 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AmfrQ9R049 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AmfrQ9R049 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AmfrQ9R049 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
AmfrQ9R049 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.35□□□□□ -0.11
AmfrQ9R049 Gm45784-201ENSMUST00000188360 142 ntBASIC14.35□□□□□ -0.11
AmfrQ9R049 Gm44069-201ENSMUST00000204898 506 ntBASIC14.35□□□□□ -0.11
AmfrQ9R049 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.35□□□□□ -0.11
AmfrQ9R049 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.35□□□□□ -0.11
AmfrQ9R049 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.35□□□□□ -0.11
AmfrQ9R049 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.35□□□□□ -0.11
AmfrQ9R049 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AmfrQ9R049 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.35□□□□□ -0.11
AmfrQ9R049 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
AmfrQ9R049 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AmfrQ9R049 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Gm12203-201ENSMUST00000118235 598 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 Gm12209-201ENSMUST00000120089 596 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Gm29705-201ENSMUST00000212598 474 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms