Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm22442-201ENSMUST00000157256 144 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm25604-201ENSMUST00000158359 133 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col4a4Q9QZR9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a4Q9QZR9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Gm12943-201ENSMUST00000119616 210 ntBASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Gm4310-201ENSMUST00000177847 889 ntBASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a4Q9QZR9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm14807-201ENSMUST00000116640 983 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm43912-201ENSMUST00000204352 538 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Gm45500-201ENSMUST00000211676 803 ntBASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a4Q9QZR9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms