Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Clcf1Q9QZM3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Mir686-201ENSMUST00000102174 109 ntBASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Gm27572-201ENSMUST00000183702 255 ntBASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Gm6007-201ENSMUST00000208170 823 ntBASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clcf1Q9QZM3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Clcf1Q9QZM3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.55
Clcf1Q9QZM3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Clcf1Q9QZM3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm11637-201ENSMUST00000120601 592 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm11978-201ENSMUST00000122315 466 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm28693-202ENSMUST00000190758 331 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm45331-201ENSMUST00000209868 554 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Clcf1Q9QZM3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms