Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn5Q9JL35 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn5Q9JL35 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Hmgn5Q9JL35 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmgn5Q9JL35 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmgn5Q9JL35 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Gm7063-201ENSMUST00000186840 981 ntBASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmgn5Q9JL35 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Gm26035-201ENSMUST00000083065 308 ntBASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmgn5Q9JL35 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms