Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ldb3Q9JKS4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm23931-201ENSMUST00000103842 109 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm11591-201ENSMUST00000120063 702 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Snora78-201ENSMUST00000158630 128 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm27514-201ENSMUST00000183692 110 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm38092-201ENSMUST00000195600 653 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm18062-201ENSMUST00000208020 547 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm18055-201ENSMUST00000208254 547 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ldb3Q9JKS4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm25261-201ENSMUST00000157416 134 ntBASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm16296-201ENSMUST00000159905 325 ntBASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.6□□□□□ -0.55
Ldb3Q9JKS4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms