Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco4Q9JIS3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Mir698-201ENSMUST00000102164 109 ntBASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm25990-201ENSMUST00000102440 86 ntBASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm4899-201ENSMUST00000178708 719 ntBASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Gm6443-201ENSMUST00000203599 874 ntBASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco4Q9JIS3 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smco4Q9JIS3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco4Q9JIS3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smco4Q9JIS3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco4Q9JIS3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smco4Q9JIS3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms