Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnft1Q9DCN7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnft1Q9DCN7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnft1Q9DCN7 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.53□□□□□ -0.4
Rnft1Q9DCN7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnft1Q9DCN7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnft1Q9DCN7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gm19220-201ENSMUST00000222682 803 ntBASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnft1Q9DCN7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm5687-201ENSMUST00000118252 640 ntBASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnft1Q9DCN7 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms