Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm14723-201ENSMUST00000118686 215 ntBASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm13297-201ENSMUST00000120205 934 ntBASIC16.85■□□□□ 0.29
U2af1Q9D883 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm37489-201ENSMUST00000191883 159 ntBASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm5904-201ENSMUST00000210286 865 ntBASIC16.85■□□□□ 0.29
U2af1Q9D883 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.85■□□□□ 0.29
U2af1Q9D883 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.85■□□□□ 0.29
U2af1Q9D883 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.85■□□□□ 0.29
U2af1Q9D883 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm9368-201ENSMUST00000219348 831 ntBASIC16.85■□□□□ 0.29
U2af1Q9D883 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm22058-201ENSMUST00000083393 310 ntBASIC16.85■□□□□ 0.29
U2af1Q9D883 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
U2af1Q9D883 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
U2af1Q9D883 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
U2af1Q9D883 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
U2af1Q9D883 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm12241-201ENSMUST00000118330 726 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm4986-201ENSMUST00000119731 549 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm13492-201ENSMUST00000119772 665 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.84■□□□□ 0.29
U2af1Q9D883 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm16296-201ENSMUST00000159905 325 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.84■□□□□ 0.29
U2af1Q9D883 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.84■□□□□ 0.29
U2af1Q9D883 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Cts7-204ENSMUST00000225321 1257 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.84■□□□□ 0.29
U2af1Q9D883 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
U2af1Q9D883 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.84■□□□□ 0.29
U2af1Q9D883 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
U2af1Q9D883 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
U2af1Q9D883 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
U2af1Q9D883 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
U2af1Q9D883 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
U2af1Q9D883 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
U2af1Q9D883 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.83■□□□□ 0.28
U2af1Q9D883 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.83■□□□□ 0.28
U2af1Q9D883 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Gm38266-201ENSMUST00000194931 421 ntBASIC16.83■□□□□ 0.28
U2af1Q9D883 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.83■□□□□ 0.28
U2af1Q9D883 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
U2af1Q9D883 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.83■□□□□ 0.28
U2af1Q9D883 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
U2af1Q9D883 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
U2af1Q9D883 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
U2af1Q9D883 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms