Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx56Q9D0R4 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm7063-201ENSMUST00000186840 981 ntBASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm4768-201ENSMUST00000206199 686 ntBASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.49□□□□□ -0.25
Ddx56Q9D0R4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Gm23363-201ENSMUST00000175024 79 ntBASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Gm19163-201ENSMUST00000223313 780 ntBASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx56Q9D0R4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ddx56Q9D0R4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms