Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smurf1Q9CUN6 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm15823-201ENSMUST00000064305 670 ntBASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smurf1Q9CUN6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm4804-201ENSMUST00000182234 999 ntBASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm27618-201ENSMUST00000183671 60 ntBASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Gm44344-201ENSMUST00000200287 129 ntBASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smurf1Q9CUN6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms