Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smc1aQ9CU62 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Proscos-202ENSMUST00000178990 666 ntBASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Gm9257-201ENSMUST00000221254 232 ntBASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1aQ9CU62 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.35□□□□□ -0.11
Smc1aQ9CU62 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Gm27331-201ENSMUST00000183705 60 ntBASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Gm29705-201ENSMUST00000212598 474 ntBASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.35□□□□□ -0.11
Smc1aQ9CU62 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1aQ9CU62 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1aQ9CU62 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1aQ9CU62 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1aQ9CU62 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.34□□□□□ -0.11
Smc1aQ9CU62 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1aQ9CU62 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1aQ9CU62 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.34□□□□□ -0.11
Smc1aQ9CU62 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms