Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Gm9230-201ENSMUST00000188228 532 ntBASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldnd1Q9CQX5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Mir874-201ENSMUST00000104769 76 ntBASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Gm10752-201ENSMUST00000218348 729 ntBASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Gm1821-202ENSMUST00000227415 750 ntBASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldnd1Q9CQX5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Gm23251-201ENSMUST00000103773 110 ntBASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Gm17391-201ENSMUST00000171036 126 ntBASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Gm8365-201ENSMUST00000197334 648 ntBASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Gm43916-201ENSMUST00000205062 967 ntBASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms