Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf111Q99ML9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm11918-201ENSMUST00000121660 179 ntBASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.45□□□□□ -0.42
Rnf111Q99ML9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Rnf111Q99ML9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.44□□□□□ -0.42
Rnf111Q99ML9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.44□□□□□ -0.42
Rnf111Q99ML9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf111Q99ML9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.43□□□□□ -0.42
Rnf111Q99ML9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf111Q99ML9 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms