Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Thumpd1Q99J36 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Gm21854-201ENSMUST00000179901 471 ntBASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Gm27390-201ENSMUST00000184516 176 ntBASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Gm2213-201ENSMUST00000197485 688 ntBASIC11.43□□□□□ -0.58
Thumpd1Q99J36 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Gm26035-201ENSMUST00000083065 308 ntBASIC11.43□□□□□ -0.58
Thumpd1Q99J36 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thumpd1Q99J36 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm15371-201ENSMUST00000117057 784 ntBASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms