Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm27023-201ENSMUST00000182372 285 ntBASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm29199-201ENSMUST00000187766 775 ntBASIC15.12■□□□□ 0.01
Col20a1Q923P0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.12■□□□□ 0.01
Col20a1Q923P0 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.12■□□□□ 0.01
Col20a1Q923P0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col20a1Q923P0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.11■□□□□ 0.01
Col20a1Q923P0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.11■□□□□ 0.01
Col20a1Q923P0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.11■□□□□ 0.01
Col20a1Q923P0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col20a1Q923P0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col20a1Q923P0 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.11■□□□□ 0.01
Col20a1Q923P0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.1■□□□□ 0.01
Col20a1Q923P0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.1■□□□□ 0.01
Col20a1Q923P0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm15276-201ENSMUST00000145953 498 ntBASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm38317-201ENSMUST00000195564 343 ntBASIC15.1■□□□□ 0.01
Col20a1Q923P0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.1■□□□□ 0.01
Col20a1Q923P0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms