Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip1Q922J3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC19.95■□□□□ 0.79
Clip1Q922J3 Gm43947-201ENSMUST00000203019 959 ntBASIC19.95■□□□□ 0.79
Clip1Q922J3 Gm17812-201ENSMUST00000204935 318 ntBASIC19.95■□□□□ 0.79
Clip1Q922J3 Gm19994-201ENSMUST00000217086 586 ntBASIC19.95■□□□□ 0.79
Clip1Q922J3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
Clip1Q922J3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
Clip1Q922J3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
Clip1Q922J3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Clip1Q922J3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Gm10176-201ENSMUST00000159707 2264 ntBASIC19.95■□□□□ 0.78
Clip1Q922J3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC19.95■□□□□ 0.78
Clip1Q922J3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Gm44065-201ENSMUST00000203184 3527 ntBASIC19.95■□□□□ 0.78
Clip1Q922J3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC19.95■□□□□ 0.78
Clip1Q922J3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC19.95■□□□□ 0.78
Clip1Q922J3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC19.95■□□□□ 0.78
Clip1Q922J3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clip1Q922J3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Clip1Q922J3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Clip1Q922J3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC19.94■□□□□ 0.78
Clip1Q922J3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Gm13394-201ENSMUST00000121658 1000 ntBASIC19.94■□□□□ 0.78
Clip1Q922J3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC19.94■□□□□ 0.78
Clip1Q922J3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 AC163667.3-201ENSMUST00000225774 222 ntBASIC19.94■□□□□ 0.78
Clip1Q922J3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Clip1Q922J3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Clip1Q922J3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clip1Q922J3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC19.93■□□□□ 0.78
Clip1Q922J3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Clip1Q922J3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC19.93■□□□□ 0.78
Clip1Q922J3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC19.93■□□□□ 0.78
Clip1Q922J3 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC19.93■□□□□ 0.78
Clip1Q922J3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clip1Q922J3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip1Q922J3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
Clip1Q922J3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clip1Q922J3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip1Q922J3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC19.92■□□□□ 0.78
Clip1Q922J3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Clip1Q922J3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Clip1Q922J3 Rmrp-201ENSMUST00000157463 271 ntBASIC19.92■□□□□ 0.78
Clip1Q922J3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC19.92■□□□□ 0.78
Clip1Q922J3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC19.92■□□□□ 0.78
Clip1Q922J3 AL732506.1-201ENSMUST00000226420 281 ntBASIC19.92■□□□□ 0.78
Clip1Q922J3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip1Q922J3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clip1Q922J3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clip1Q922J3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip1Q922J3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clip1Q922J3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clip1Q922J3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Clip1Q922J3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Clip1Q922J3 Gm12286-201ENSMUST00000119246 1002 ntBASIC19.91■□□□□ 0.78
Clip1Q922J3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms