Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdhb1Q91Y08 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdhb1Q91Y08 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb1Q91Y08 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Gm12363-201ENSMUST00000122250 668 ntBASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Gm7029-201ENSMUST00000173226 450 ntBASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Gm26927-201ENSMUST00000182385 965 ntBASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Gm29127-201ENSMUST00000188304 517 ntBASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Pcdhb1Q91Y08 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms