Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm23931-201ENSMUST00000103842 109 ntBASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm23363-201ENSMUST00000175024 79 ntBASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm42693-201ENSMUST00000196779 631 ntBASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm42660-201ENSMUST00000197733 947 ntBASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm18584-201ENSMUST00000203098 964 ntBASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb2Q91Y00 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm25261-201ENSMUST00000157416 134 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm22121-201ENSMUST00000175148 54 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm42627-201ENSMUST00000197347 224 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm6013-201ENSMUST00000212264 699 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb2Q91Y00 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.62□□□□□ -0.23
Pcdhb2Q91Y00 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms